comparative genomics reveals adaptation by alteromonas sp. sn2 to marine tidal-flat conditions cold tolerance and aromatic hydrocarbon metabolism比较基因组学揭示适应alteromonas sp。sn2海洋潮坪环境寒冷宽容和芳香族碳氢化合物的代谢.pdfVIP

comparative genomics reveals adaptation by alteromonas sp. sn2 to marine tidal-flat conditions cold tolerance and aromatic hydrocarbon metabolism比较基因组学揭示适应alteromonas sp。sn2海洋潮坪环境寒冷宽容和芳香族碳氢化合物的代谢.pdf

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comparative genomics reveals adaptation by alteromonas sp. sn2 to marine tidal-flat conditions cold tolerance and aromatic hydrocarbon metabolism比较基因组学揭示适应alteromonas sp。sn2海洋潮坪环境寒冷宽容和芳香族碳氢化合物的代谢

Comparative Genomics Reveals Adaptation by Alteromonas sp. SN2 to Marine Tidal-Flat Conditions: Cold Tolerance and Aromatic Hydrocarbon Metabolism 1 1 1 1 2 Renukaradhya K. Math , Hyun Mi Jin , Jeong Myeong Kim , Yoonsoo Hahn , Woojun Park , 3 1 Eugene L. Madsen , Che Ok Jeon * 1 School of Biological Sciences, Research Center for Biomolecules and Biosystems, Chung-Ang University, Seoul, Republic of Korea, 2 Division of Environmental Science and Ecological Engineering, Korea University, Seoul, Republic of Korea, 3 Department of Microbiology, Cornell University, Ithaca, New York, United States of America Abstract Alteromonas species are globally distributed copiotrophic bacteria in marine habitats. Among these, sea-tidal flats are distinctive: undergoing seasonal temperature and oxygen-tension changes, plus periodic exposure to petroleum hydrocarbons. Strain SN2 of the genus Alteromonas was isolated from hydrocarbon-contaminated sea-tidal flat sediment and has been shown to metabolize aromatic hydrocarbons there. Strain SN2’s genomic features were analyzed bioinformatically and compared to those of Alteromonas macleodii ecotypes: AltDE and ATCC 27126. Strain SN2’s genome differs from that of the other two strains in: size, average nucleotide identity value, tRNA genes, noncoding RNAs, dioxygenase gene content, signal transduction genes, and the degree to which genes collected during the Global Ocean Sampling project are represented. Patterns in genetic characteristics (e.g., GC content, GC skew, Karlin signature, CRISPR gene homology) indicate that strain SN2’s gen

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