有哪些信誉好的足球投注网站a high density consensus genetic map of tetraploid cotton that integrates multiple component maps through molecular marker redundancy check四倍体的高密度遗传图谱共识棉花,集成了多个组件映射通过分子标记冗余校验.pdfVIP
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a high density consensus genetic map of tetraploid cotton that integrates multiple component maps through molecular marker redundancy check四倍体的高密度遗传图谱共识棉花,集成了多个组件映射通过分子标记冗余校验
A High Density Consensus Genetic Map of Tetraploid
Cotton That Integrates Multiple Component Maps
through Molecular Marker Redundancy Check
1,2 3 4 4 5 4
Anna Blenda , David D. Fang , Jean-Franc¸ois Rami , Olivier Garsmeur , Feng Luo , Jean-Marc Lacape *
1 Department of Genetics and Biochemistry, Clemson University, Clemson, South Carolina, United States of America, 2 Department of Biology, Erskine College, Due West,
South Carolina, United States of America, 3 Cotton Fiber Bioscience Research Unit, USDA-ARS-SRRC, New Orleans, Louisiana, United States of America, 4 CIRAD, UMR
AGAP, Montpellier, France, 5 School of Computing, Clemson University, Clemson, South Carolina, United States of America
Abstract
A consensus genetic map of tetraploid cotton was constructed using six high-density maps and after the integration of a
sequence-based marker redundancy check. Public cotton SSR libraries (17,343 markers) were curated for sequence
redundancy using 90% as a similarity cutoff. As a result, 20% of the markers (3,410) could be considered as redundant with
some other markers. The marker redundancy information had been a crucial part of the map integration process, in which
the six most informative interspecific Gossypium hirsutum 6G. barbadense genetic maps were used for assembling a high
density consensus (HDC) map for tetraploid cotton. With redundant markers being removed, the HDC map could be
constructed thanks to the sufficient number of collinear non-redundant markers in common between the component maps.
The HDC map consists of 8,254 loci, originating from 6,669 markers, and spans 4,070 cM, with an average of 2 loci per cM.
The HDC map presents a high rate of locus duplications, as 1,292
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