deep sequencing whole transcriptome exploration of the σe regulon in neisseria meningitidis深度测序的全转录组勘探σe调节子在脑膜炎奈瑟菌.pdfVIP
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deep sequencing whole transcriptome exploration of the σe regulon in neisseria meningitidis深度测序的全转录组勘探σe调节子在脑膜炎奈瑟菌
Deep Sequencing Whole Transcriptome Exploration of the sE Regulon in Neisseria meningitidis 1 2 Robert Antonius Gerhardus Huis in ’t Veld *, Antonius Marcellinus Willemsen , Antonius Hubertus 2,3 4 4 1 1,5 Cornelis van Kampen , Edward John Bradley , Frank Baas , Yvonne Pannekoek , Arie van der Ende 1 Department of Medical Microbiology, Center of Infection and Immunity Amsterdam (CINIMA), Academic Medical Center, Amsterdam, The Netherlands, 2 Bioinformatics Laboratory, Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, Amsterdam, The Netherlands, 3 Biosystems Data Analysis, Swammerdam Institute for Life Science, University of Amsterdam, Amsterdam, The Netherlands, 4 Department of Genome Analysis, Academic Medical Center, Amsterdam, The Netherlands, 5 Reference Laboratory for Bacterial Meningitis, Academic Medical Center, Amsterdam, The Netherlands Abstract Bacteria live in an ever-changing environment and must alter protein expression promptly to adapt to these changes and survive. Specific response genes that are regulated by a subset of alternative s70-like transcription factors have evolved in order to respond to this changing environment. Recently, we have described the existence of a sE regulon including the anti-s-factor MseR in the obligate human bacterial pathogen Neisseria meningitidis. To unravel the complete sE regulon in N. meningitidis, we sequenced total RNA transcriptional content of wild type meningococci and compared it with that of mseR mutant cells (DmseR) in which sE is highly expressed. Eleven coding genes and one non-coding gene were found to
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