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influences anxiety and depressio
Gut–brain axis: how the microbiome
influences anxiety and depression
Jane A. Foster and Karen-Anne McVey Neufeld
Department of Psychiatry and Behavioural Neurosciences, McMaster University, at St. Joseph’s Healthcare, 50 Charlton Ave. E,
T3308, Hamilton, ON, L8N 4A6, Canada
ReviewGlossary
Bacterial colonization: naturally occurring bacterial colonization of infants
(human) or pups (rodents) begins at birth and continues through postnatal life.
Experimentally, mice lacking microbiota (GF mice) can be colonized by
removal from the gnotobiotic rearing conditions, followed by exposure to
microbiota (often exposure to mouse feces); these mice are referred to as
‘conventionalized’ mice.
Bacterial phyla: several bacteria phyla are represented in the intestinal
microbiome, including Firmicutes, Bacteroides, Proteobacteria, Actinobacteria,
Fusobacteria, and Verrucomicrobia. Recent metagenomic population studies
have attempted to classify different profiles of bacterial phyla across groups of
humans that are referred to as ‘enterotypes’.
Commensal intestinal microbiota: the human intestine is home to nearly 100
trillion microbes. The relation between these microbes and their host begins at
birth and continues throughout life as a mutually beneficial relation. These
naturally occurring, ever-present microbes are referred to as commensal
intestinal microbiota or commensals.
Microbiome: refers to the collection of microbes and their genetic material in a
particular site, for example the human GI tract.
Probiotics: live microorganisms that are administered as dietary supplementsWithin the first few days of life, humans are colonized by
commensal intestinal microbiota. Here, we review re-
cent findings showing that microbiota are important in
normal healthy brain function. We also discuss the rela-
tion between stress and microbiota, and how alterations
in microbiota influence stress-related behaviors. New
studies show that bacteria, including commensal, probi-
otic, and pathogeni
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